GCID Viral Projects

Humans are constantly exposed to a plethora of viruses that cause disease. Highly infectious pathogens such as influenza virus, rotavirus, enteroviruses, and respiratory syncytial virus are a persistent public health concern. Recent outbreaks caused by West Nile, Zika, and other viruses remind us of the ongoing threat posed by emerging and re-remerging viruses. The viral GCID projects at the JCVI focus on defining the genomes of viruses and characterizing virus-host interactions to better understand viral evolution, elucidate the underlying molecular mechanisms that cause disease, and aid in the development of novel vaccines and therapeutics.

Genomics of Zika Virus

Investigating the genomics of Zika virus throughout the Americas

Show Project

Genomics of Rotavirus

Sequencing Rotavirus genomes isolated from around the world

Show Project

Genetic Diversity and Evolutionary Dynamics of Influenza A and B Viruses

Show Project

Genetic Diversity and Evolutionary Dynamics of Respiratory Syncytial Viruses (RSV)

Show Project

Genetic Diversity and Evolutionary Dynamics of West Nile Viruses

Show Project

Genetic Diversity and Evolutionary Dynamics of Eastern Equine Encephalitis Viruses (EEEV)

Show Project

Genetic Diversity and Evolutionary Dynamics of Rotaviruses

Show Project

Influenza: Host-Virus-Microbiome Interactions

Show Project

Respiratory Syncytial Virus: Host-Virus-Microbiome Interactions

Show Project

Impact of Viral Intra-Host Diversity on Transmission Dynamics and Antiviral Resistance

Show Project

Role of Microbiome Diversity, Microbial Transcriptome and Host Gene Expression

Show Project

Genomics of Filoviruses

Show Project

Paramyxovirus Sequencing

Show Project

Sequencing of Human Adenovirus Clinical Isolates From Recent and Reference Genomes

Show Project

Arbovirus Sequencing Project

Show Project

CDC Division of Viral Diseases-vaccine Preventable Disease Agents Sequencing Project

Show Project

Sequencing of South American Human Group a Rotavirus Genomes

Show Project

Molecular Epidemiology of Enteric Calici Viruses

Show Project

Coronavirus Sequencing to Track Diversity, Virus Adaptation, and Pathogenesis in Humans and Animals

Show Project

Complete Genome Sequencing of a Collection of Eastern Equine Encephalitis Viruses (EEEV)

Show Project

Norovirus Genomics and Its Applications to Vaccine Development

Show Project

The Evolution of Human Respiratory Viruses in Peru

Show Project

Sequence Studies of RSV From a 2012-2013 Community Outbreak in USA

Show Project

Rotavirus Genomics and Metagenomics of African Stool Samples

Show Project

Arbovirus Sequencing Project II

Show Project

Role of the Untranslated Regions of the Influenza a Virus Replication and Vaccines

Show Project

Transmission Kinetics of RSV Infection

Show Project