Publications

Nature communications. 2016-01-07; 7.10147.
Local admixture of amplified and diversified secreted pathogenesis determinants shapes mosaic Toxoplasma gondii genomes
Lorenzi H, Khan A, Behnke MS, Namasivayam S, Swapna LS, Hadjithomas M, Karamycheva S, Pinney D, Brunk BP, Ajioka JW, Ajzenberg D, Boothroyd JC, Boyle JP, Dardé ML, Diaz-Miranda MA, Dubey JP, Fritz HM, Gennari SM, Gregory BD, Kim K, Saeij JP, Su C, White MW, Zhu XQ, Howe DK, Rosenthal BM, Grigg ME, Parkinson J, Liu L, Kissinger JC, Roos DS, Sibley LD
PMID: 26738725
Applied and environmental microbiology. 2016-01-04; 82.5: 1613-24.
Trace Metal Acquisition by Marine Heterotrophic Bacterioplankton with Contrasting Trophic Strategies
Hogle SL, Thrash JC, Dupont CL, Barbeau KA
PMID: 26729720
PloS one. 2016-01-01; 11.10: e0166202.
High-Throughput Sequencing Reveals Circulating miRNAs as Potential Biomarkers of Kidney Damage in Patients with Systemic Lupus Erythematosus
Navarro-Quiroz E, Pacheco-Lugo L, Lorenzi H, Díaz-Olmos Y, Almendrales L, Rico E, Navarro R, España-Puccini P, Iglesias A, Egea E, Aroca G
PMID: 27835701
NeuroImage. 2016-01-01; 124.Pt B: 1149-54.
The Pediatric Imaging, Neurocognition, and Genetics (PING) Data Repository
Jernigan TL, Brown TT, Hagler DJ, Akshoomoff N, Bartsch H, Newman E, Thompson WK, Bloss CS, Murray SS, Schork N, Kennedy DN, Kuperman JM, McCabe C, Chung Y, Libiger O, Maddox M, Casey BJ, Chang L, Ernst TM, Frazier JA, Gruen JR, Sowell ER, Kenet T, Kaufmann WE, Mostofsky S, Amaral DG, Dale AM, Pediatric Imaging, Neurocognition and Genetics Study
PMID: 25937488
Biomaterials. 2016-01-01; 74.267-79.
Sensitizing Pseudomonas aeruginosa to antibiotics by electrochemical disruption of membrane functions
Niepa TH, Snepenger LM, Wang H, Sivan S, Gilbert JL, Jones MB, Ren D
PMID: 26461119
Cytometry. Part A : the journal of the International Society for Analytical Cytology. 2016-01-01; 89.1: 13-5.
Automated analysis of flow cytometry data comes of age
Brinkman RR, Aghaeepour N, Finak G, Gottardo R, Mosmann T, Scheuermann RH
PMID: 26812230
Plasmid. 2016-01-01; 83.8-11.
Whole genome sequencing of diverse Shiga toxin-producing and non-producing Escherichia coli strains reveals a variety of virulence and novel antibiotic resistance plasmids
Losada L, DebRoy C, Radune D, Kim M, Sanka R, Brinkac L, Kariyawasam S, Shelton D, Fratamico PM, Kapur V, Feng PC
PMID: 26746359
Cytometry. Part A : the journal of the International Society for Analytical Cytology. 2016-01-01; 89.1: 71-88.
Mapping cell populations in flow cytometry data for cross-sample comparison using the Friedman-Rafsky test statistic as a distance measure
Hsiao C, Liu M, Stanton R, McGee M, Qian Y, Scheuermann RH
PMID: 26274018
Standards in genomic sciences. 2016-01-01; 11.86.
Two draft genome sequences of Pseudomonas jessenii strains isolated from a copper contaminated site in Denmark
Qin Y, Wang D, Brandt KK, Rensing C
PMID: 27833718
Drug metabolism and disposition: the biological fate of chemicals. 2016-01-01; 44.1: 151-61.
In Vivo Profiling and Distribution of Known and Novel Phase I and Phase II Metabolites of Efavirenz in Plasma, Urine, and Cerebrospinal Fluid
Aubert V, Battegay M, Bernasconi E, Böni J, Braun DL, Bucher HC, Burton-Jeangros C, Calmy A, Cavassini M, Dollenmaier G, Egger M, Elzi L, Fehr J, Fellay J, Furrer H, Fux CA, Gorgievski M, Günthard H, Haerry D, Hasse B, Hirsch HH, Hoffmann M, Hösli I, Kahlert C, Kaiser L, Keiser O, Klimkait T, Kouyos R, Kovari H, Ledergerber B, Martinetti G, Martinez de Tejada B, Marzolini C, Metzner K, Müller N, Nadal D, Nicca D, Pantaleo G, Rauch A, Regenass S, Rudin C, Schöni-Affolter F, Schmid P, Speck R, Stöckle M, Tarr P, Trkola A, Vernazza P, Weber R, Yerly S
PMID: 26553012