Publications

Nature protocols. 2016-03-01; 11.3: 499-524.
Using single nuclei for RNA-seq to capture the transcriptome of postmortem neurons
Krishnaswami SR, Grindberg RV, Novotny M, Venepally P, Lacar B, Bhutani K, Linker SB, Pham S, Erwin JA, Miller JA, Hodge R, McCarthy JK, Kelder M, McCorrison J, Aevermann BD, Fuertes FD, Scheuermann RH, Lee J, Lein ES, Schork N, McConnell MJ, Gage FH, Lasken RS
PMID: 26890679
The Prostate. 2016-03-01; 76.4: 349-58.
Spectrum of mitochondrial genomic variation and associated clinical presentation of prostate cancer in South African men
McCrow JP, Petersen DC, Louw M, Chan EK, Harmeyer K, Vecchiarelli S, Lyons RJ, Bornman MS, Hayes VM
PMID: 26660354
PloS one. 2016-02-25; 11.2: e0150038.
Development of a Flow Cytometry-Based Method for Rapid Detection of Escherichia coli and Shigella Spp. Using an Oligonucleotide Probe
Xue Y, Wilkes JG, Moskal TJ, Williams AJ, Cooper WM, Nayak R, Rafii F, Buzatu DA
PMID: 26913737
Cell reports. 2016-02-23; 14.7: 1632-1640.
Differential Regulation of Interferon Responses by Ebola and Marburg Virus VP35 Proteins
Edwards MR, Liu G, Mire CE, Sureshchandra S, Luthra P, Yen B, Shabman RS, Leung DW, Messaoudi I, Geisbert TW, Amarasinghe GK, Basler CF
PMID: 26876165
Nature communications. 2016-02-19; 7.10536.
Whole-genome mutational burden analysis of three pluripotency induction methods
Bhutani K, Nazor KL, Williams R, Tran H, Dai H, Džakula Ž, Cho EH, Pang AWC, Rao M, Cao H, Schork NJ, Loring JF
PMID: 26892726
Genome announcements. 2016-02-18; 4.1:
High-Quality Draft Genome Sequence of Low-pH-Active Veillonella parvula Strain SHI-1, Isolated from Human Saliva within an In Vitro Oral Biofilm Model
Edlund A, Liu Q, Watling M, To TT, Bumgarner RE, He X, Shi W, McLean JS
PMID: 26893419
PLoS neglected tropical diseases. 2016-02-18; 10.2: e0004403.
What Makes a Bacterial Species Pathogenic?:Comparative Genomic Analysis of the Genus Leptospira
Fouts DE, Matthias MA, Adhikarla H, Adler B, Amorim-Santos L, Berg DE, Bulach D, Buschiazzo A, Chang YF, Galloway RL, Haake DA, Haft DH, Hartskeerl R, Ko AI, Levett PN, Matsunaga J, Mechaly AE, Monk JM, Nascimento AL, Nelson KE, Palsson B, Peacock SJ, Picardeau M, Ricaldi JN, Thaipandungpanit J, Wunder EA, Yang XF, Zhang JJ, Vinetz JM
PMID: 26890609
Journal of virology. 2016-02-15; 90.4: 1997-2007.
Molecular Evolution and Intraclade Recombination of Enterovirus D68 during the 2014 Outbreak in the United States
Tan Y, Hassan F, Schuster JE, Simenauer A, Selvarangan R, Halpin RA, Lin X, Fedorova N, Stockwell TB, Lam TT, Chappell JD, Hartert TV, Holmes EC, Das SR
PMID: 26656685
Cell host & microbe. 2016-02-10; 19.2: 227-39.
Intestinal REG3 Lectins Protect against Alcoholic Steatohepatitis by Reducing Mucosa-Associated Microbiota and Preventing Bacterial Translocation
Wang L, Fouts DE, Stärkel P, Hartmann P, Chen P, Llorente C, Depew J, Moncera K, Ho SB, Brenner DA, Hooper LV, Schnabl B
PMID: 26867181
Scientific reports. 2016-02-10; 6.20686.
Standardizing Flow Cytometry Immunophenotyping Analysis from the Human ImmunoPhenotyping Consortium
Finak G, Langweiler M, Jaimes M, Malek M, Taghiyar J, Korin Y, Raddassi K, Devine L, Obermoser G, Pekalski ML, Pontikos N, Diaz A, Heck S, Villanova F, Terrazzini N, Kern F, Qian Y, Stanton R, Wang K, Brandes A, Ramey J, Aghaeepour N, Mosmann T, Scheuermann RH, Reed E, Palucka K, Pascual V, Blomberg BB, Nestle F, Nussenblatt RB, Brinkman RR, Gottardo R, Maecker H, McCoy JP
PMID: 26861911