Publications

Genome announcements. 2015-01-22; 3.1:
Genome Sequences of the Listeria ivanovii subsp. ivanovii Type Strain and Two Listeria ivanovii subsp. londoniensis Strains
Hupfeld M, Fouts DE, Loessner MJ, Klumpp J
PMID: 25614561
PLoS biology. 2015-01-20; 13.1: e1002050.
Where next for microbiome research?
Waldor MK, Tyson G, Borenstein E, Ochman H, Moeller A, Finlay BB, Kong HH, Gordon JI, Nelson KE, Dabbagh K, Smith H
PMID: 25602283
International journal of molecular sciences. 2015-01-16; 16.1: 2020-33.
Designed surface residue substitutions in [NiFe] hydrogenase that improve electron transfer characteristics
Yonemoto IT, Smith HO, Weyman PD
PMID: 25603181
eLife. 2015-01-16; 4.e05055.
The contrasting phylodynamics of human influenza B viruses
Vijaykrishna D, Holmes EC, Joseph U, Fourment M, Su YC, Halpin R, Lee RT, Deng YM, Gunalan V, Lin X, Stockwell TB, Fedorova NB, Zhou B, Spirason N, Kühnert D, Bošková V, Stadler T, Costa AM, Dwyer DE, Huang QS, Jennings LC, Rawlinson W, Sullivan SG, Hurt AC, Maurer-Stroh S, Wentworth DE, Smith GJ, Barr IG
PMID: 25594904
Proceedings of the National Academy of Sciences of the United States of America. 2015-01-06; 112.1: 244-9.
Cultivation of a human-associated TM7 phylotype reveals a reduced genome and epibiotic parasitic lifestyle
He X, McLean JS, Edlund A, Yooseph S, Hall AP, Liu SY, Dorrestein PC, Esquenazi E, Hunter RC, Cheng G, Nelson KE, Lux R, Shi W
PMID: 25535390
Advances in experimental medicine and biology. 2015-01-01; 883.187-214.
Mapping the Protein-Protein Interactome Networks Using Yeast Two-Hybrid Screens
Rajagopala SV
PMID: 26621469
Nucleic acids research. 2015-01-01; 43.Database issue: D213-21.
The InterPro protein families database: the classification resource after 15 years
Mitchell A, Chang HY, Daugherty L, Fraser M, Hunter S, Lopez R, McAnulla C, McMenamin C, Nuka G, Pesseat S, Sangrador-Vegas A, Scheremetjew M, Rato C, Yong SY, Bateman A, Punta M, Attwood TK, Sigrist CJ, Redaschi N, Rivoire C, Xenarios I, Kahn D, Guyot D, Bork P, Letunic I, Gough J, Oates M, Haft D, Huang H, Natale DA, Wu CH, Orengo C, Sillitoe I, Mi H, Thomas PD, Finn RD
PMID: 25428371
Plant & cell physiology. 2015-01-01; 56.1: e12.
A maize database resource that captures tissue-specific and subcellular-localized gene expression, via fluorescent tags and confocal imaging (Maize Cell Genomics Database)
Krishnakumar V, Choi Y, Beck E, Wu Q, Luo A, Sylvester A, Jackson D, Chan AP
PMID: 25432973
Nucleic acids research. 2015-01-01; 43.Database issue: D1003-9.
Araport: the Arabidopsis information portal
Krishnakumar V, Hanlon MR, Contrino S, Ferlanti ES, Karamycheva S, Kim M, Rosen BD, Cheng CY, Moreira W, Mock SA, Stubbs J, Sullivan JM, Krampis K, Miller JR, Micklem G, Vaughn M, Town CD
PMID: 25414324
Journal of wildlife diseases. 2015-01-01; 51.1: 290-3.
Isolation of type A influenza viruses from Red-necked Grebes (Podiceps grisegena)
Lebarbenchon C, Wilcox BR, Poulson RL, Slusher MJ, Fedorova NB, Katzel DA, Cardona CJ, Knutsen GA, Wentworth DE, Stallknecht DE
PMID: 25380358