Publications

Nucleic acids research. 2015-01-01; 43.Database issue: D1003-9.

Araport: the Arabidopsis information portal

Krishnakumar V, Hanlon MR, Contrino S, Ferlanti ES, Karamycheva S, Kim M, Rosen BD, Cheng CY, Moreira W, Mock SA, Stubbs J, Sullivan JM, Krampis K, Miller JR, Micklem G, Vaughn M, Town CD

PMID: 25414324

PloS one. 2015-01-01; 10.9: e0139355.

Weighted Score Tests Implementing Model-Averaging Schemes in Detection of Rare Variants in Case-Control Studies

Coombes B, Basu S, Guha S, Schork N

PMID: 26436424

Methods in molecular biology (Clifton, N.J.). 2015-01-01; 1295.65-74.

Urinary pellet sample preparation for shotgun proteomic analysis of microbial infection and host-pathogen interactions

Yu Y, Pieper R

PMID: 25820714

Nucleic acids research. 2015-01-01; 43.Database issue: D213-21.

The InterPro protein families database: the classification resource after 15 years

Mitchell A, Chang HY, Daugherty L, Fraser M, Hunter S, Lopez R, McAnulla C, McMenamin C, Nuka G, Pesseat S, Sangrador-Vegas A, Scheremetjew M, Rato C, Yong SY, Bateman A, Punta M, Attwood TK, Sigrist CJ, Redaschi N, Rivoire C, Xenarios I, Kahn D, Guyot D, Bork P, Letunic I, Gough J, Oates M, Haft D, Huang H, Natale DA, Wu CH, Orengo C, Sillitoe I, Mi H, Thomas PD, Finn RD

PMID: 25428371

Plant & cell physiology. 2015-01-01; 56.1: e1.

MTGD: The Medicago truncatula genome database

Krishnakumar V, Kim M, Rosen BD, Karamycheva S, Bidwell SL, Tang H, Town CD

PMID: 25432968

Gut microbes. 2015-01-01; 6.2: 110-9.

Characterization of the human gut microbiome during travelers' diarrhea

Youmans BP, Ajami NJ, Jiang ZD, Campbell F, Wadsworth WD, Petrosino JF, DuPont HL, Highlander SK

PMID: 25695334

Gastroenterology. 2015-01-01; 148.1: 203-214.e16.

Supplementation of saturated long-chain fatty acids maintains intestinal eubiosis and reduces ethanol-induced liver injury in mice

Chen P, Torralba M, Tan J, Embree M, Zengler K, Stärkel P, van Pijkeren JP, Depew J, Loomba R, Ho SB, Bajaj JS, Mutlu EA, Keshavarzian A, Tsukamoto H, Nelson KE, Fouts DE, Schnabl B

PMID: 25239591

Advances in experimental medicine and biology. 2015-01-01; 883.77-87.

Urine sample preparation in 96-well filter plates to characterize inflammatory and infectious diseases of the urinary tract

Yu Y, Pieper R

PMID: 25355571

PloS one. 2015-01-01; 10.9: e0137466.

Cloning Should Be Simple: Escherichia coli DH5α-Mediated Assembly of Multiple DNA Fragments with Short End Homologies

Kostylev M, Otwell AE, Richardson RE, Suzuki Y

PMID: 26348330

BMC genomics. 2014-12-24; 15.1: 1180.

TREC-IN: gene knock-in genetic tool for genomes cloned in yeast

Chandran S, Noskov VN, Segall-Shapiro TH, Ma L, Whiteis C, Lartigue C, Jores J, Vashee S, Chuang RY

PMID: 25539750