Publications

Nature methods. 2011-06-29; 8.7: 528-9.

PSICQUIC and PSISCORE: accessing and scoring molecular interactions

Aranda B, Blankenburg H, Kerrien S, Brinkman FS, Ceol A, Chautard E, Dana JM, De Las Rivas J, Dumousseau M, Galeota E, Gaulton A, Goll J, Hancock RE, Isserlin R, Jimenez RC, Kerssemakers J, Khadake J, Lynn DJ, Michaut M, O'Kelly G, Ono K, Orchard S, Prieto C, Razick S, Rigina O, Salwinski L, Simonovic M, Velankar S, Winter A, Wu G, Bader GD, Cesareni G, Donaldson IM, Eisenberg D, Kleywegt GJ, Overington J, Ricard-Blum S, Tyers M, Albrecht M, Hermjakob H

PMID: 21716279

Genome biology. 2011-06-27; 12.6: 117.

Genomes of uncultured eukaryotes: sorting FACS from fiction

Worden AZ, Dupont C, Allen AE

PMID: 21722350

BMC microbiology. 2011-06-24; 11.147.

In vivo versus in vitro protein abundance analysis of Shigella dysenteriae type 1 reveals changes in the expression of proteins involved in virulence, stress and energy metabolism

Kuntumalla S, Zhang Q, Braisted JC, Fleischmann RD, Peterson SN, Donohue-Rolfe A, Tzipori S, Pieper R

PMID: 21702961

Proceedings of the National Academy of Sciences of the United States of America. 2011-06-07; 108.23: 9649-54.

Stage-specific proteomic expression patterns of the human filarial parasite Brugia malayi and its endosymbiont Wolbachia

Bennuru S, Meng Z, Ribeiro JM, Semnani RT, Ghedin E, Chan K, Lucas DA, Veenstra TD, Nutman TB

PMID: 21606368

BMC genomics. 2011-06-06; 12.294.

Comparative genomic analysis of Vibrio parahaemolyticus: serotype conversion and virulence

Chen Y, Stine OC, Badger JH, Gil AI, Nair GB, Nishibuchi M, Fouts DE

PMID: 21645368

Journal of bacteriology. 2011-06-01; 193.12: 2892-3.

Genome sequences of Mycoplasma alligatoris A21JP2T and Mycoplasma crocodyli MP145T

Brown DR, Farmerie WG, May M, Benders GA, Durkin AS, Hlavinka K, Hostetler J, Jackson J, Johnson J, Miller RH, Paralanov V, Radune D, Szczypinski B, Glass JI

PMID: 21460083

Journal of bacteriology. 2011-06-01; 193.12: 2745-55.

Biological systems discovery in silico: radical S-adenosylmethionine protein families and their target peptides for posttranslational modification

Haft DH, Basu MK

PMID: 21478363

Journal of bacteriology. 2011-06-01; 193.12: 3154-5.

Draft genome sequence of the chemolithoheterotrophic, halophilic methylotroph Methylophaga thiooxydans DMS010

Boden R, Ferriera S, Johnson J, Kelly DP, Murrell JC, Schäfer H

PMID: 21478352

The Journal of general virology. 2011-06-01; 92.Pt 6: 1369-79.

Molecular characterization of a new species in the genus Alphacoronavirus associated with mink epizootic catarrhal gastroenteritis

Vlasova AN, Halpin R, Wang S, Ghedin E, Spiro DJ, Saif LJ

PMID: 21346029

American journal of epidemiology. 2011-06-01; 173.11: 1336-42.

Impact of phenotype definition on genome-wide association signals: empirical evaluation in human immunodeficiency virus type 1 infection

Evangelou E, Fellay J, Colombo S, Martinez-Picado J, Obel N, Goldstein DB, Telenti A, Ioannidis JP

PMID: 21490045