Publications

BMC genomics. 2008-01-30; 9.58.
Insights into the Musa genome: syntenic relationships to rice and between Musa species
Lescot M, Piffanelli P, Ciampi AY, Ruiz M, Blanc G, Leebens-Mack J, da Silva FR, Santos CM, D'Hont A, Garsmeur O, Vilarinhos AD, Kanamori H, Matsumoto T, Ronning CM, Cheung F, Haas BJ, Althoff R, Arbogast T, Hine E, Pappas GJ, Sasaki T, Souza MT, Miller RN, Glaszmann JC, Town CD
PMID: 18234080
PloS one. 2008-01-23; 3.1: e1456.
The Sorcerer II Global Ocean Sampling Expedition: metagenomic characterization of viruses within aquatic microbial samples
Williamson SJ, Rusch DB, Yooseph S, Halpern AL, Heidelberg KB, Glass JI, Andrews-Pfannkoch C, Fadrosh D, Miller CS, Sutton G, Frazier M, Venter JC
PMID: 18213365
Genome biology. 2008-01-11; 9.1: R7.
Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments
Haas BJ, Salzberg SL, Zhu W, Pertea M, Allen JE, Orvis J, White O, Buell CR, Wortman JR
PMID: 18190707
BMC genomics. 2008-01-07; 9.5.
Viral genome sequencing by random priming methods
Djikeng A, Halpin R, Kuzmickas R, Depasse J, Feldblyum J, Sengamalay N, Afonso C, Zhang X, Anderson NG, Ghedin E, Spiro DJ
PMID: 18179705
Methods in molecular biology (Clifton, N.J.). 2008-01-01; 422.89-99.
Preparation of urine samples for proteomic analysis
Pieper R
PMID: 18369889
PLoS neglected tropical diseases. 2008-01-01; 2.8: e282.
Targets of the Entamoeba histolytica transcription factor URE3-BP
Gilchrist CA, Baba DJ, Zhang Y, Crasta O, Evans C, Caler E, Sobral BW, Bousquet CB, Leo M, Hochreiter A, Connell SK, Mann BJ, Petri WA
PMID: 18846235
Methods in molecular biology (Clifton, N.J.). 2008-01-01; 422.65-77.
Survey sequencing and radiation hybrid mapping to construct comparative maps
Hitte C, Kirkness EF, Ostrander EA, Galibert F
PMID: 18629661
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology. 2008-01-01; 16.8: 1193-202.
Tackling the characterization of canine chromosomal breakpoints with an integrated in-situ/in-silico approach: the canine PAR and PAB
Young AC, Kirkness EF, Breen M
PMID: 19005636
The open proteomics journal. 2008-01-01; 1.106-115.
Widespread Occurrence of Non-Enzymatic Deamidations of Asparagine Residues in Yersinia pestis Proteins Resulting from Alkaline pH Membrane Extraction Conditions
Suh MJ, Alami H, Clark DJ, Parmar PP, Robinson JM, Huang ST, Fleischmann RD, Peterson SN, Pieper R
PMID: 20428468
Genome biology. 2008-01-01; 9.12: R183.
Comparative genomics of mutualistic viruses of Glyptapanteles parasitic wasps
Desjardins CA, Gundersen-Rindal DE, Hostetler JB, Tallon LJ, Fadrosh DW, Fuester RW, Pedroni MJ, Haas BJ, Schatz MC, Jones KM, Crabtree J, Forberger H, Nene V
PMID: 19116010

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