Publications

Genome biology. 2010-01-01; 11.11: R52.

Towards a comprehensive structural variation map of an individual human genome

Pang AW, MacDonald JR, Pinto D, Wei J, Rafiq MA, Conrad DF, Park H, Hurles ME, Lee C, Venter JC, Kirkness EF, Levy S, Feuk L, Scherer SW

PMID: 20482838

Genome biology. 2010-01-01; 11.11: R73.

Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire

Lévesque CA, Brouwer H, Cano L, Hamilton JP, Holt C, Huitema E, Raffaele S, Robideau GP, Thines M, Win J, Zerillo MM, Beakes GW, Boore JL, Busam D, Dumas B, Ferriera S, Fuerstenberg SI, Gachon CM, Gaulin E, Govers F, Grenville-Briggs L, Horner N, Hostetler J, Jiang RH, Johnson J, Krajaejun T, Lin H, Meijer HJ, Moore B, Morris P, Phuntmart V, Puiu D, Shetty J, Stajich JE, Tripathy S, Wawra S, van West P, Whitty BR, Coutinho PM, Henrissat B, Martin F, Thomas PD, Tyler BM, de Vries RP, Kamoun S, Yandell M, Tisserat N, Buell CR

PMID: 20626842

Genome biology. 2010-01-01; 11.10: R107.

Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species

Donati C, Hiller NL, Tettelin H, Muzzi A, Croucher NJ, Angiuoli SV, Oggioni M, Dunning Hotopp JC, Hu FZ, Riley DR, Covacci A, Mitchell TJ, Bentley SD, Kilian M, Ehrlich GD, Rappuoli R, Moxon ER, Masignani V

PMID: 21034474

Methods in molecular biology (Clifton, N.J.). 2010-01-01; 634.147-55.

Targeted amplification of mutant strands for efficient site-directed mutagenesis and mutant screening

Young L, Dong Q

PMID: 20676982

Antimicrobial agents and chemotherapy. 2010-01-01; 54.1: 103-8.

Allelic exchange and mutant selection demonstrate that common clinical embCAB gene mutations only modestly increase resistance to ethambutol in Mycobacterium tuberculosis

Safi H, Fleischmann RD, Peterson SN, Jones MB, Jarrahi B, Alland D

PMID: 19822701

Nucleic acids research. 2010-01-01; 38.Database issue: D408-14.

Pathema: a clade-specific bioinformatics resource center for pathogen research

Brinkac LM, Davidsen T, Beck E, Ganapathy A, Caler E, Dodson RJ, Durkin AS, Harkins DM, Lorenzi H, Madupu R, Sebastian Y, Shrivastava S, Thiagarajan M, Orvis J, Sundaram JP, Crabtree J, Galens K, Zhao Y, Inman JM, Montgomery R, Schobel S, Galinsky K, Tanenbaum DM, Resnick A, Zafar N, White O, Sutton G

PMID: 19843611

Nucleic acids research. 2010-01-01; 38.Database issue: D336-9.

The Protein Naming Utility: a rules database for protein nomenclature

Goll J, Montgomery R, Brinkac LM, Schobel S, Harkins DM, Sebastian Y, Shrivastava S, Durkin S, Sutton G

PMID: 20007151

Cytometry. Part B, Clinical cytometry. 2010-01-01; 78 Suppl 1.S69-82.

Elucidation of seventeen human peripheral blood B-cell subsets and quantification of the tetanus response using a density-based method for the automated identification of cell populations in multidimensional flow cytometry data

Qian Y, Wei C, Eun-Hyung Lee F, Campbell J, Halliley J, Lee JA, Cai J, Kong YM, Sadat E, Thomson E, Dunn P, Seegmiller AC, Karandikar NJ, Tipton CM, Mosmann T, Sanz I, Scheuermann RH

PMID: 20839340

BMC genomics. 2009-12-22; 10.624.

Potential impact of stress activated retrotransposons on genome evolution in a marine diatom

Maumus F, Allen AE, Mhiri C, Hu H, Jabbari K, Vardi A, Grandbastien MA, Bowler C

PMID: 20028555

BMC genetics. 2009-12-18; 10.85.

Assessing the utility of whole-genome amplified serum DNA for array-based high throughput genotyping

Bucasas KL, Pandya GA, Pradhan S, Fleischmann RD, Peterson SN, Belmont JW

PMID: 20021669