Publications

Proceedings of the National Academy of Sciences of the United States of America. 2009-09-15; 106.37: 15527-33.
The genomic basis of trophic strategy in marine bacteria
Lauro FM, McDougald D, Thomas T, Williams TJ, Egan S, Rice S, DeMaere MZ, Ting L, Ertan H, Johnson J, Ferriera S, Lapidus A, Anderson I, Kyrpides N, Munk AC, Detter C, Han CS, Brown MV, Robb FT, Kjelleberg S, Cavicchioli R
PMID: 19805210
Applied and environmental microbiology. 2009-09-01; 75.18: 5963-71.
Antimicrobial resistance-conferring plasmids with similarity to virulence plasmids from avian pathogenic Escherichia coli strains in Salmonella enterica serovar Kentucky isolates from poultry
Fricke WF, McDermott PF, Mammel MK, Zhao S, Johnson TJ, Rasko DA, Fedorka-Cray PJ, Pedroso A, Whichard JM, Leclerc JE, White DG, Cebula TA, Ravel J
PMID: 19648374
PLoS pathogens. 2009-09-01; 5.9: e1000570.
Evolutionarily conserved herpesviral protein interaction networks
Fossum E, Friedel CC, Rajagopala SV, Titz B, Baiker A, Schmidt T, Kraus T, Stellberger T, Rutenberg C, Suthram S, Bandyopadhyay S, Rose D, von Brunn A, Uhlmann M, Zeretzke C, Dong YA, Boulet H, Koegl M, Bailer SM, Koszinowski U, Ideker T, Uetz P, Zimmer R, Haas J
PMID: 19730696
Journal of bacteriology. 2009-09-01; 191.17: 5398-408.
Cell envelope perturbation induces oxidative stress and changes in iron homeostasis in Vibrio cholerae
Sikora AE, Beyhan S, Bagdasarian M, Yildiz FH, Sandkvist M
PMID: 19542276
Genome research. 2009-09-01; 19.9: 1516-26.
Mobile elements create structural variation: analysis of a complete human genome
Xing J, Zhang Y, Han K, Salem AH, Sen SK, Huff CD, Zhou Q, Kirkness EF, Levy S, Batzer MA, Jorde LB
PMID: 19439515
Journal of virology. 2009-09-01; 83.17: 8832-41.
Mixed infection and the genesis of influenza virus diversity
Ghedin E, Fitch A, Boyne A, Griesemer S, Depasse J, Bera J, Zhang X, Halpin RA, Smit M, Jennings L, St George K, Holmes EC, Spiro DJ
PMID: 19553313
Applied and environmental microbiology. 2009-09-01; 75.18: 5821-30.
Discovery of [NiFe] hydrogenase genes in metagenomic DNA: cloning and heterologous expression in Thiocapsa roseopersicina
Maróti G, Tong Y, Yooseph S, Baden-Tillson H, Smith HO, Kovács KL, Frazier M, Venter JC, Xu Q
PMID: 19633107
BMC biotechnology. 2009-08-23; 9.72.
High quality protein microarray using in situ protein purification
Kwon K, Grose C, Pieper R, Pandya GA, Fleischmann RD, Peterson SN
PMID: 19698181
Journal of bacteriology. 2009-08-01; 191.15: 4750-7.
Comparative genomics of the IncA/C multidrug resistance plasmid family
Fricke WF, Welch TJ, McDermott PF, Mammel MK, Leclerc JE, White DG, Cebula TA, Ravel J
PMID: 19482926
Applied and environmental microbiology. 2009-08-01; 75.15: 5047-57.
Coastal strains of marine Synechococcus species exhibit increased tolerance to copper shock and a distinctive transcriptional response relative to those of open-ocean strains
Stuart RK, Dupont CL, Johnson DA, Paulsen IT, Palenik B
PMID: 19502430