Publications

Frontiers in microbiology. 2019-01-11; 9.3323.
Exploiting the Oral Microbiome to Prevent Tooth Decay: Has Evolution Already Provided the Best Tools?
Baker JL, Edlund A
PMID: 30687294
Nucleic acids research. 2019-01-08; 47.D1: D564-D572.
Genome properties in 2019: a new companion database to InterPro for the inference of complete functional attributes
Richardson LJ, Rawlings ND, Salazar GA, Almeida A, Haft DR, Ducq G, Sutton GG, Finn RD
PMID: 30364992
Nucleic acids research. 2019-01-08; 47.D1: D351-D360.
InterPro in 2019: improving coverage, classification and access to protein sequence annotations
Mitchell AL, Attwood TK, Babbitt PC, Blum M, Bork P, Bridge A, Brown SD, Chang HY, El-Gebali S, Fraser MI, Gough J, Haft DR, Huang H, Letunic I, Lopez R, Luciani A, Madeira F, Marchler-Bauer A, Mi H, Natale DA, Necci M, Nuka G, Orengo C, Pandurangan AP, Paysan-Lafosse T, Pesseat S, Potter SC, Qureshi MA, Rawlings ND, Redaschi N, Richardson LJ, Rivoire C, Salazar GA, Sangrador-Vegas A, Sigrist CJA, Sillitoe I, Sutton GG, Thanki N, Thomas PD, Tosatto SCE, Yong SY, Finn RD
PMID: 30398656
BMC bioinformatics. 2019-01-07; 20.1: 8.
OMeta: an ontology-based, data-driven metadata tracking system
Singh I, Kuscuoglu M, Harkins DM, Sutton G, Fouts DE, Nelson KE
PMID: 30612540
Annual review of marine science. 2019-01-03; 11.131-158.
Planktonic Marine Archaea
Santoro AE, Richter RA, Dupont CL
PMID: 30212260
American journal of human genetics. 2019-01-03; 104.1: 186.
Response to Whiffin et al
Shah N, Claire Hou YC, Yu HC, Sainger R, Caskey CT, Venter JC, Telenti A
PMID: 30609405
Methods in molecular biology (Clifton, N.J.). 2019-01-01; 2021.241-257.
Detection of Neutrophil Extracellular Traps in Urine
Yu Y, Kwon K, Pieper R
PMID: 31309510
Journal of virology. 2019-01-01; 93.1:
Multiple Introductions and Antigenic Mismatch with Vaccines May Contribute to Increased Predominance of G12P[8] Rotaviruses in the United States
Ogden KM, Tan Y, Akopov A, Stewart LS, McHenry R, Fonnesbeck CJ, Piya B, Carter MH, Fedorova NB, Halpin RA, Shilts MH, Edwards KM, Payne DC, Esona MD, Mijatovic-Rustempasic S, Chappell JD, Patton JT, Halasa NB, Das SR
PMID: 30333170
Methods in molecular biology (Clifton, N.J.). 2019-01-01; 1911.47-69.
Hepatitis C Virus Database and Bioinformatics Analysis Tools in the Virus Pathogen Resource (ViPR)
Zhang Y, Zmasek C, Sun G, Larsen CN, Scheuermann RH
PMID: 30593617
Journal of oral microbiology. 2019-01-01; 11.1: 1536181.
Xylitol and sorbitol effects on the microbiome of saliva and plaque
Rafeek R, Carrington CVF, Gomez A, Harkins D, Torralba M, Kuelbs C, Addae J, Moustafa A, Nelson KE
PMID: 30598728