Publications

The New phytologist. 2019-04-01; 222.2: 1061-1075.
Lycophyte plastid genomics: extreme variation in GC, gene and intron content and multiple inversions between a direct and inverted orientation of the rRNA repeat
Mower JP, Ma PF, Grewe F, Taylor A, Michael TP, VanBuren R, Qiu YL
PMID: 30556907
Microbial ecology. 2019-04-01; 77.3: 808-820.
Co-occurrence of Anaerobes in Human Chronic Wounds
Choi Y, Banerjee A, McNish S, Couch KS, Torralba MG, Lucas S, Tovchigrechko A, Madupu R, Yooseph S, Nelson KE, Shanmugam VK, Chan AP
PMID: 30141127
Frontiers in microbiology. 2019-03-26; 10.559.
Phenotypic and Genotypic Characterization of Acinetobacter spp. Panel Strains: A Cornerstone to Facilitate Antimicrobial Development
D'Souza R, Pinto NA, Phuong NL, Higgins PG, Vu TN, Byun JH, Cho YL, Choi JR, Yong D
PMID: 30972044
mBio. 2019-03-26; 10.2:
Rapid Replacement of Acinetobacter baumannii Strains Accompanied by Changes in Lipooligosaccharide Loci and Resistance Gene Repertoire
Adams MD, Wright MS, Karichu JK, Venepally P, Fouts DE, Chan AP, Richter SS, Jacobs MR, Bonomo RA
PMID: 30914511
Bioinformatics (Oxford, England). 2019-03-15; 35.6: 1049-1050.
Large-scale comparative analysis of microbial pan-genomes using PanOCT
Inman JM, Sutton GG, Beck E, Brinkac LM, Clarke TH, Fouts DE
PMID: 30165579
mSphere. 2019-03-13; 4.2:
Emergence of New Delhi Metallo-β-Lactamase (NDM-5) in Klebsiella quasipneumoniae from Neonates in a Nigerian Hospital
Brinkac LM, White R, D'Souza R, Nguyen K, Obaro SK, Fouts DE
PMID: 30867330
Molecular biology and evolution. 2019-03-01; 36.3: 435-446.
Lateral Gene Transfer Shapes the Distribution of RuBisCO among Candidate Phyla Radiation Bacteria and DPANN Archaea
Jaffe AL, Castelle CJ, Dupont CL, Banfield JF
PMID: 30544151
Genome biology and evolution. 2019-03-01; 11.3: 688-705.
Genetic Diversity and Gene Family Expansions in Members of the Genus Entamoeba
Wilson IW, Weedall GD, Lorenzi H, Howcroft T, Hon CC, Deloger M, Guillén N, Paterson S, Clark CG, Hall N
PMID: 30668670
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases. 2019-03-01; 68.68-76.
A novel approach for the identification and phylogenetic delineation of human Mycoplasma species and strains using genomic segment sequence analysis
Roachford OSE, Nelson KE, Mohapatra BR
PMID: 30529087
Virology. 2019-03-01; 529.29-42.
Classification of human Herpesviridae proteins using Domain-architecture Aware Inference of Orthologs (DAIO)
Zmasek CM, Knipe DM, Pellett PE, Scheuermann RH
PMID: 30660046