Publications

Hepatology (Baltimore, Md.). 2016-11-01; 64.5: 1547-1558.
Shared genetic effects between hepatic steatosis and fibrosis: A prospective twin study
Cui J, Chen CH, Lo MT, Schork N, Bettencourt R, Gonzalez MP, Bhatt A, Hooker J, Shaffer K, Nelson KE, Long MT, Brenner DA, Sirlin CB, Loomba R, For The Genetics Of Nafld In Twins Consortium
PMID: 27315352
Molecular microbiology. 2016-11-01; 102.4: 628-641.
A role for copper in protozoan grazing - two billion years selecting for bacterial copper resistance
Hao X, Lüthje F, Rønn R, German NA, Li X, Huang F, Kisaka J, Huffman D, Alwathnani HA, Zhu YG, Rensing C
PMID: 27528008
mSystems. 2016-11-01; 1.6:
Spatial Molecular Architecture of the Microbial Community of a Peltigera Lichen
Garg N, Zeng Y, Edlund A, Melnik AV, Sanchez LM, Mohimani H, Gurevich A, Miao V, Schiffler S, Lim YW, Luzzatto-Knaan T, Cai S, Rohwer F, Pevzner PA, Cichewicz RH, Alexandrov T, Dorrestein PC
PMID: 28028548
Proceedings of the National Academy of Sciences of the United States of America. 2016-10-18; 113.42: 11931-11936.
Epitope specificity plays a critical role in regulating antibody-dependent cell-mediated cytotoxicity against influenza A virus
He W, Tan GS, Mullarkey CE, Lee AJ, Lam MM, Krammer F, Henry C, Wilson PC, Ashkar AA, Palese P, Miller MS
PMID: 27698132
Proceedings of the National Academy of Sciences of the United States of America. 2016-10-18; 113.42: 11901-11906.
Deep sequencing of 10,000 human genomes
Telenti A, Pierce LC, Biggs WH, di Iulio J, Wong EH, Fabani MM, Kirkness EF, Moustafa A, Shah N, Xie C, Brewerton SC, Bulsara N, Garner C, Metzker G, Sandoval E, Perkins BA, Och FJ, Turpaz Y, Venter JC
PMID: 27702888
The Journal of infectious diseases. 2016-10-15; 214.suppl 3: S102-S109.
Ebola Virus Epidemiology and Evolution in Nigeria
Folarin OA, Ehichioya D, Schaffner SF, Winnicki SM, Wohl S, Eromon P, West KL, Gladden-Young A, Oyejide NE, Matranga CB, Deme AB, James A, Tomkins-Tinch C, Onyewurunwa K, Ladner JT, Palacios G, Nosamiefan I, Andersen KG, Omilabu S, Park DJ, Yozwiak NL, Nasidi A, Garry RF, Tomori O, Sabeti PC, Happi CT
PMID: 27377746
BMC medical genomics. 2016-10-13; 9.1: 63.
Protecting genomic data analytics in the cloud: state of the art and opportunities
Tang H, Jiang X, Wang X, Wang S, Sofia H, Fox D, Lauter K, Malin B, Telenti A, Xiong L, Ohno-Machado L
PMID: 27733153
mBio. 2016-10-11; 7.5:
Genetic Dissection of the Type VI Secretion System in Acinetobacter and Identification of a Novel Peptidoglycan Hydrolase, TagX, Required for Its Biogenesis
Weber BS, Hennon SW, Wright MS, Scott NE, de Berardinis V, Foster LJ, Ayala JA, Adams MD, Feldman MF
PMID: 27729508
BMC bioinformatics. 2016-10-06; 17.Suppl 13: 333.
VDJML: a file format with tools for capturing the results of inferring immune receptor rearrangements
Toby IT, Levin MK, Salinas EA, Christley S, Bhattacharya S, Breden F, Buntzman A, Corrie B, Fonner J, Gupta NT, Hershberg U, Marthandan N, Rosenfeld A, Rounds W, Rubelt F, Scarborough W, Scott JK, Uduman M, Vander Heiden JA, Scheuermann RH, Monson N, Kleinstein SH, Cowell LG
PMID: 27766961
Proceedings of the National Academy of Sciences of the United States of America. 2016-10-04; 113.40: E5944-E5951.
Optimal activation of Fc-mediated effector functions by influenza virus hemagglutinin antibodies requires two points of contact
Leon PE, He W, Mullarkey CE, Bailey MJ, Miller MS, Krammer F, Palese P, Tan GS
PMID: 27647907