Publications
Frontiers in bioinformatics. 2022-10-24; 2.1020189.
Early detection of emerging SARS-CoV-2 variants of interest for experimental evaluation
PMID: 36353215
Nature communications. 2022-10-21; 13.1: 6275.
Single cell transcriptomic profiling of a neuron-astrocyte assembloid tauopathy model
PMID: 36271092
Bioinformatics (Oxford, England). 2022-10-14; 38.20: 4735-4744.
FastMix: a versatile data integration pipeline for cell type-specific biomarker inference
PMID: 36018232
eLife. 2022-10-14; 11.
Early immune markers of clinical, virological, and immunological outcomes in patients with COVID-19: a multi-omics study
PMID: 36239699
BMC bioinformatics. 2022-10-12; 23.1: 419.
VEBA: a modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metagenomes
PMID: 36224545
Scientific reports. 2022-10-06; 12.1: 16731.
A novel vaccine based on SARS-CoV-2 CD4+ and CD8+ T cell conserved epitopes from variants Alpha to Omicron
PMID: 36202985
Journal of dental research. 2022-10-01; 101.11: 1274-1288.
A Roadmap for the Human Oral and Craniofacial Cell Atlas
PMID: 36154725
PloS one. 2022-09-23; 17.9: e0275070.
Machine learning for cell type classification from single nucleus RNA sequencing data
PMID: 36149937
The journal of physical chemistry. B. 2022-09-15; 126.36: 6820-6834.
Toward the Complete Functional Characterization of a Minimal Bacterial Proteome
PMID: 36048731
Proceedings of the National Academy of Sciences of the United States of America. 2022-09-13; 119.37: e2204717119.
SARS-CoV-2 variant spike and accessory gene mutations alter pathogenesis
PMID: 36040867