Publications

BMC bioinformatics. 2014-01-01; 15 Suppl 9.S15.

ProbeAlign: incorporating high-throughput sequencing-based structure probing information into ncRNA homology search

Ge P, Zhong C, Zhang S

PMID: 25253206

Journal of virology. 2014-01-01; 88.2: 1175-88.

Risk assessment of H2N2 influenza viruses from the avian reservoir

Jones JC, Baranovich T, Marathe BM, Danner AF, Seiler JP, Franks J, Govorkova EA, Krauss S, Webster RG

PMID: 24227848

International journal of bioinformatics research and applications. 2014-01-01; 10.4-5: 498-518.

Finding consensus stable local optimal structures for aligned RNA sequences and its application to discovering riboswitch elements

Li Y, Zhong C, Zhang S

PMID: 24989865

PloS one. 2014-01-01; 9.3: e92075.

North Atlantic migratory bird flyways provide routes for intercontinental movement of avian influenza viruses

Dusek RJ, Hallgrimsson GT, Ip HS, Jónsson JE, Sreevatsan S, Nashold SW, Teslaa JL, Enomoto S, Halpin RA, Lin X, Fedorova N, Stockwell TB, Dugan VG, Wentworth DE, Hall JS

PMID: 24647410

PloS one. 2014-01-01; 9.10: e104794.

Molecular and evolutionary analysis of NEAr-iron Transporter (NEAT) domains

Honsa ES, Maresso AW, Highlander SK

PMID: 25153520

PloS one. 2013-12-20; 8.12: e81352.

Microbiome analysis of stool samples from African Americans with colon polyps

Brim H, Yooseph S, Zoetendal EG, Lee E, Torralbo M, Laiyemo AO, Shokrani B, Nelson K, Ashktorab H

PMID: 24376500

Genome announcements. 2013-12-19; 1.6:

Genome Sequences of 28 Bordetella pertussis U.S. Outbreak Strains Dating from 2010 to 2012

Harvill ET, Goodfield LL, Ivanov Y, Meyer JA, Newth C, Cassiday P, Tondella ML, Liao P, Zimmerman J, Meert K, Wessel D, Berger J, Dean JM, Holubkov R, Burr J, Liu T, Brinkac L, Kim M, Losada L

PMID: 24356839

Chemistry & biology. 2013-12-19; 20.12: 1441-6.

Proofreading of noncognate acyl adenylates by an acyl-coenzyme a ligase

Manandhar M, Cronan JE

PMID: 24269150

PloS one. 2013-12-11; 8.12: e81862.

A metagenomic framework for the study of airborne microbial communities

Yooseph S, Andrews-Pfannkoch C, Tenney A, McQuaid J, Williamson S, Thiagarajan M, Brami D, Zeigler-Allen L, Hoffman J, Goll JB, Fadrosh D, Glass J, Adams MD, Friedman R, Venter JC

PMID: 24349140

Journal of biological engineering. 2013-12-10; 7.1: 30.

Assembly of eukaryotic algal chromosomes in yeast

Karas BJ, Molparia B, Jablanovic J, Hermann WJ, Lin YC, Dupont CL, Tagwerker C, Yonemoto IT, Noskov VN, Chuang RY, Allen AE, Glass JI, Hutchison CA, Smith HO, Venter JC, Weyman PD

PMID: 24325901