Publications

Proceedings of the National Academy of Sciences of the United States of America. 2013-12-03; 110.49: 19802-7.
RNA-sequencing from single nuclei
Grindberg RV, Yee-Greenbaum JL, McConnell MJ, Novotny M, O'Shaughnessy AL, Lambert GM, Araúzo-Bravo MJ, Lee J, Fishman M, Robbins GE, Lin X, Venepally P, Badger JH, Galbraith DW, Gage FH, Lasken RS
PMID: 24248345
Current biology : CB. 2013-12-02; 23.23: 2365-74.
Circadian yin-yang regulation and its manipulation to globally reprogram gene expression
Xu Y, Weyman PD, Umetani M, Xiong J, Qin X, Xu Q, Iwasaki H, Johnson CH
PMID: 24210617
Water research. 2013-12-01; 47.19: 7120-30.
Identifying the microbial communities and operational conditions for optimized wastewater treatment in microbial fuel cells
Ishii S, Suzuki S, Norden-Krichmar TM, Wu A, Yamanaka Y, Nealson KH, Bretschger O
PMID: 24183402
Virology. 2013-12-01; 447.1-2: 45-51.
Metadata-driven comparative analysis tool for sequences (meta-CATS): an automated process for identifying significant sequence variations that correlate with virus attributes
Pickett BE, Liu M, Sadat EL, Squires RB, Noronha JM, He S, Jen W, Zaremba S, Gu Z, Zhou L, Larsen CN, Bosch I, Gehrke L, McGee M, Klem EB, Scheuermann RH
PMID: 24210098
Infection and immunity. 2013-12-01; 81.12: 4635-48.
Analysis of the proteome of intracellular Shigella flexneri reveals pathways important for intracellular growth
Pieper R, Fisher CR, Suh MJ, Huang ST, Parmar P, Payne SM
PMID: 24101689
Genome announcements. 2013-11-07; 1.6:
Sequence Determination of Burkholderia pseudomallei Strain NCTC 13392 Colony Morphology Variants
Vipond J, Kane J, Hatch G, McCorrison J, Nierman WC, Losada L
PMID: 24201202
Science (New York, N.Y.). 2013-11-01; 342.6158: 632-7.
Mosaic copy number variation in human neurons
McConnell MJ, Lindberg MR, Brennand KJ, Piper JC, Voet T, Cowing-Zitron C, Shumilina S, Lasken RS, Vermeesch JR, Hall IM, Gage FH
PMID: 24179226
Environmental microbiology. 2013-11-01; 15.11: 3077-86.
Methanobactin and MmoD work in concert to act as the 'copper-switch' in methanotrophs
Semrau JD, Jagadevan S, Dispirito AA, Khalifa A, Scanlan J, Bergman BH, Freemeier BC, Baral BS, Bandow NL, Vorobev A, Haft DH, Vuilleumier S, Murrell JC
PMID: 23682956
Molecular & cellular proteomics : MCP. 2013-11-01; 12.11: 3036-51.
Novel Burkholderia mallei virulence factors linked to specific host-pathogen protein interactions
Memisević V, Zavaljevski N, Pieper R, Rajagopala SV, Kwon K, Townsend K, Yu C, Yu X, DeShazer D, Reifman J, Wallqvist A
PMID: 23800426
Nature structural & molecular biology. 2013-11-01; 20.11: 1243-9.
Divergent evolution of protein conformational dynamics in dihydrofolate reductase
Bhabha G, Ekiert DC, Jennewein M, Zmasek CM, Tuttle LM, Kroon G, Dyson HJ, Godzik A, Wilson IA, Wright PE
PMID: 24077226