Publications

Molecular microbiology. 2012-08-01; 85.4: 669-83.
RecA mediates MgpB and MgpC phase and antigenic variation in Mycoplasma genitalium, but plays a minor role in DNA repair
Burgos R, Wood GE, Young L, Glass JI, Totten PA
PMID: 22686427
BMC microbiology. 2012-07-27; 12.151.
A Multilocus Sequence Typing System (MLST) reveals a high level of diversity and a genetic component to Entamoeba histolytica virulence
Gilchrist CA, Ali IK, Kabir M, Alam F, Scherbakova S, Ferlanti E, Weedall GD, Hall N, Haque R, Petri WA, Caler E
PMID: 22839995
ACS synthetic biology. 2012-07-20; 1.7: 267-73.
Assembly of large, high G+C bacterial DNA fragments in yeast
Noskov VN, Karas BJ, Young L, Chuang RY, Gibson DG, Lin YC, Stam J, Yonemoto IT, Suzuki Y, Andrews-Pfannkoch C, Glass JI, Smith HO, Hutchison CA, Venter JC, Weyman PD
PMID: 23651249
Cell. 2012-07-20; 150.2: 389-401.
A whole-cell computational model predicts phenotype from genotype
Karr JR, Sanghvi JC, Macklin DN, Gutschow MV, Jacobs JM, Bolival B, Assad-Garcia N, Glass JI, Covert MW
PMID: 22817898
Journal of molecular biology. 2012-07-20; 420.4-5: 366-83.
Structural and functional characterization of microcin C resistance peptidase MccF from Bacillus anthracis
Nocek B, Tikhonov A, Babnigg G, Gu M, Zhou M, Makarova KS, Vondenhoff G, Van Aerschot A, Kwon K, Anderson WF, Severinov K, Joachimiak A
PMID: 22516613
Molecular systems biology. 2012-07-17; 8.595.
Global biogeography of SAR11 marine bacteria
Brown MV, Lauro FM, DeMaere MZ, Muir L, Wilkins D, Thomas T, Riddle MJ, Fuhrman JA, Andrews-Pfannkoch C, Hoffman JM, McQuaid JB, Allen A, Rintoul SR, Cavicchioli R
PMID: 22806143
Journal of industrial microbiology & biotechnology. 2012-07-01; 39.7: 977-85.
Partial deletion of rng (RNase G)-enhanced homoethanol fermentation of xylose by the non-transgenic Escherichia coli RM10
Manow R, Wang J, Wang Y, Zhao J, Garza E, Iverson A, Finan C, Grayburn S, Zhou S
PMID: 22374228
Trends in plant science. 2012-07-01; 17.7: 395-403.
Leveraging metabolomics for functional investigations in sequenced marine diatoms
Fernie AR, Obata T, Allen AE, Araújo WL, Bowler C
PMID: 22465020
The ISME journal. 2012-07-01; 6.7: 1403-14.
Influence of nutrients and currents on the genomic composition of microbes across an upwelling mosaic
Zeigler Allen L, Allen EE, Badger JH, McCrow JP, Paulsen IT, Elbourne LD, Thiagarajan M, Rusch DB, Nealson KH, Williamson SJ, Venter JC, Allen AE
PMID: 22278668
PLoS genetics. 2012-07-01; 8.7: e1002784.
Comparative genomics of plant-associated Pseudomonas spp.: insights into diversity and inheritance of traits involved in multitrophic interactions
Loper JE, Hassan KA, Mavrodi DV, Davis EW, Lim CK, Shaffer BT, Elbourne LD, Stockwell VO, Hartney SL, Breakwell K, Henkels MD, Tetu SG, Rangel LI, Kidarsa TA, Wilson NL, van de Mortel JE, Song C, Blumhagen R, Radune D, Hostetler JB, Brinkac LM, Durkin AS, Kluepfel DA, Wechter WP, Anderson AJ, Kim YC, Pierson LS, Pierson EA, Lindow SE, Kobayashi DY, Raaijmakers JM, Weller DM, Thomashow LS, Allen AE, Paulsen IT
PMID: 22792073