Publications

Science (New York, N.Y.). 2008-09-26; 321.5897: 1807-12.
An integrated genomic analysis of human glioblastoma multiforme
Parsons DW, Jones S, Zhang X, Lin JC, Leary RJ, Angenendt P, Mankoo P, Carter H, Siu IM, Gallia GL, Olivi A, McLendon R, Rasheed BA, Keir S, Nikolskaya T, Nikolsky Y, Busam DA, Tekleab H, Diaz LA, Hartigan J, Smith DR, Strausberg RL, Marie SK, Shinjo SM, Yan H, Riggins GJ, Bigner DD, Karchin R, Papadopoulos N, Parmigiani G, Vogelstein B, Velculescu VE, Kinzler KW
PMID: 18772396
PloS one. 2008-09-24; 3.9: e3252.
Analysis of the Pseudoalteromonas tunicata genome reveals properties of a surface-associated life style in the marine environment
Thomas T, Evans FF, Schleheck D, Mai-Prochnow A, Burke C, Penesyan A, Dalisay DS, Stelzer-Braid S, Saunders N, Johnson J, Ferriera S, Kjelleberg S, Egan S
PMID: 18813346
BMC plant biology. 2008-09-19; 8.95.
A first survey of the rye (Secale cereale) genome composition through BAC end sequencing of the short arm of chromosome 1R
Bartos J, Paux E, Kofler R, Havránková M, Kopecký D, Suchánková P, Safár J, Simková H, Town CD, Lelley T, Feuillet C, Dolezel J
PMID: 18803819
PLoS pathogens. 2008-09-12; 4.9: e1000154.
Sub-telomere directed gene expression during initiation of invasive aspergillosis
McDonagh A, Fedorova ND, Crabtree J, Yu Y, Kim S, Chen D, Loss O, Cairns T, Goldman G, Armstrong-James D, Haynes K, Haas H, Schrettl M, May G, Nierman WC, Bignell E
PMID: 18787699
Nature. 2008-09-04; 455.7209: 47-50.
Big data: The future of biocuration
Howe D, Costanzo M, Fey P, Gojobori T, Hannick L, Hide W, Hill DP, Kania R, Schaeffer M, St Pierre S, Twigger S, White O, Rhee SY
PMID: 18769432
Microbiology (Reading, England). 2008-09-01; 154.Pt 9: 2589-99.
Highly conserved genes in Geobacter species with expression patterns indicative of acetate limitation
Risso C, Methé BA, Elifantz H, Holmes DE, Lovley DR
PMID: 18757793
Environmental microbiology. 2008-09-01; 10.9: 2200-10.
It's all relative: ranking the diversity of aquatic bacterial communities
Shaw AK, Halpern AL, Beeson K, Tran B, Venter JC, Martiny JB
PMID: 18637951
Eukaryotic cell. 2008-09-01; 7.9: 1565-72.
Characterization of an Entamoeba histolytica high-mobility-group box protein induced during intestinal infection
Abhyankar MM, Hochreiter AE, Hershey J, Evans C, Zhang Y, Crasta O, Sobral BW, Mann BJ, Petri WA, Gilchrist CA
PMID: 18658254
Clinical pharmacology and therapeutics. 2008-09-01; 84.3: 306-9.
Individual genomes instead of race for personalized medicine
Ng PC, Zhao Q, Levy S, Strausberg RL, Venter JC
PMID: 18714319
PLoS pathogens. 2008-08-22; 4.8: e1000133.
Molecular epidemiology of A/H3N2 and A/H1N1 influenza virus during a single epidemic season in the United States
Nelson MI, Edelman L, Spiro DJ, Boyne AR, Bera J, Halpin R, Sengamalay N, Ghedin E, Miller MA, Simonsen L, Viboud C, Holmes EC
PMID: 18725925