Publications

Cytogenetic and genome research. 2003-01-01; 102.1-4: 347-54.
Sequence analysis of a rainbow trout cDNA library and creation of a gene index
Rexroad CE, Lee Y, Keele JW, Karamycheva S, Brown G, Koop B, Gahr SA, Palti Y, Quackenbush J
PMID: 14970727
Genome biology. 2003-01-01; 4.1: R5.
Assessing unmodified 70-mer oligonucleotide probe performance on glass-slide microarrays
Wang HY, Malek RL, Kwitek AE, Greene AS, Luu TV, Behbahani B, Frank B, Quackenbush J, Lee NH
PMID: 12540297
Molecular plant-microbe interactions : MPMI. 2003-01-01; 16.1: 43-52.
A pseudomonas syringae pv. tomato DC3000 Hrp (Type III secretion) deletion mutant expressing the Hrp system of bean pathogen P. syringae pv. syringae 61 retains normal host specificity for tomato
Fouts DE, Badel JL, Ramos AR, Rapp RA, Collmer A
PMID: 12580281
Nucleic acids research. 2003-01-01; 31.1: 371-3.
The TIGRFAMs database of protein families
Haft DH, Selengut JD, White O
PMID: 12520025
Genome biology. 2003-01-01; 4.1: 336.
Open-source software accelerates bioinformatics
Quackenbush J
PMID: 12952530
Veterinary microbiology. 2002-12-20; 90.1-4: 249-61.
Sugar metabolism by Brucellae
Essenberg RC, Seshadri R, Nelson K, Paulsen I
PMID: 12414147
Nature. 2002-12-05; 420.6915: 563-73.
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs
Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K, Tomaru Y, Hasegawa Y, Nogami A, Schönbach C, Gojobori T, Baldarelli R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A, Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V, Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF, Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ, Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL, Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR, Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K, Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R, Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C, Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z, Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N, Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K, Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A, Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A, Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M, Waterston R, Lander ES, Rogers J, Birney E, Hayashizaki Y, FANTOM Consortium, RIKEN Genome Exploration Research Group Phase I & II Team
PMID: 12466851
Plant physiology. 2002-12-01; 130.4: 2118-28.
Cloning and sequencing of cDNAs for hypothetical genes from chromosome 2 of Arabidopsis
Xiao YL, Malik M, Whitelaw CA, Town CD
PMID: 12481096
Environmental microbiology. 2002-12-01; 4.12: 809-18.
Global features of the Pseudomonas putida KT2440 genome sequence
Weinel C, Nelson KE, Tümmler B
PMID: 12534464
Environmental microbiology. 2002-12-01; 4.12: 819-23.
The genome structure of Pseudomonas putida: high-resolution mapping and microarray analysis
Stjepandić D, Weinel C, Hilbert H, Koo HL, Diehl F, Nelson KE, Tümmler B, Hoheisel JD
PMID: 12534465