GCID Publications

PLoS pathogens. 2006-12-01; 2.12: e125.
Stochastic processes are key determinants of short-term evolution in influenza a virus
Nelson MI, Simonsen L, Viboud C, Miller MA, Taylor J, George KS, Griesemer SB, Ghedin E, Ghedi E, Sengamalay NA, Spiro DJ, Volkov I, Grenfell BT, Lipman DJ, Taubenberger JK, Holmes EC
PMID: 17140286
Biology direct. 2006-10-26; 1.34.
Long intervals of stasis punctuated by bursts of positive selection in the seasonal evolution of influenza A virus
Wolf YI, Viboud C, Holmes EC, Koonin EV, Lipman DJ
PMID: 17067369
BMC genomics. 2006-09-05; 7.228.
Genome sequence alterations detected upon passage of Burkholderia mallei ATCC 23344 in culture and in mammalian hosts
Romero CM, DeShazer D, Feldblyum T, Ravel J, Woods D, Kim HS, Yu Y, Ronning CM, Nierman WC
PMID: 16953889
Nature. 2006-03-30; 440.7084: 605.
Shared data are key to beating threat from flu
Salzberg S, Ghedin E, Spiro D
PMID: 16572147
Proceedings of the National Academy of Sciences of the United States of America. 2006-01-31; 103.5: 1528-33.
Identification of a conserved bacterial protein secretion system in Vibrio cholerae using the Dictyostelium host model system
Pukatzki S, Ma AT, Sturtevant D, Krastins B, Sarracino D, Nelson WC, Heidelberg JF, Mekalanos JJ
PMID: 16432199
Annals of the New York Academy of Sciences. 2005-12-01; 1063.442-50.
Genome analysis of Coxiella burnetii species: insights into pathogenesis and evolution and implications for biodefense
Seshadri R, Samuel J
PMID: 16481558
Current opinion in genetics & development. 2005-12-01; 15.6: 609-13.
Comparative genomics of malaria parasites
Hall N, Carlton J
PMID: 16182520
Molecular and biochemical parasitology. 2005-11-01; 144.1: 1-9.
Gene discovery in Plasmodium vivax through sequencing of ESTs from mixed blood stages
Cui L, Fan Q, Hu Y, Karamycheva SA, Quackenbush J, Khuntirat B, Sattabongkot J, Carlton JM
PMID: 16085323
Nature. 2005-10-20; 437.7062: 1162-6.
Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution
Ghedin E, Sengamalay NA, Shumway M, Zaborsky J, Feldblyum T, Subbu V, Spiro DJ, Sitz J, Koo H, Bolotov P, Dernovoy D, Tatusova T, Bao Y, St George K, Taylor J, Lipman DJ, Fraser CM, Taubenberger JK, Salzberg SL
PMID: 16208317
Trends in parasitology. 2005-10-01; 21.10: 453.
Entamoeba: still more to be learned from the genome
Loftus BJ, Hall N
PMID: 16099723