Publications

Genome research. 2013-05-01; 23.5: 878-88.
Nearly finished genomes produced using gel microdroplet culturing reveal substantial intraspecies genomic diversity within the human microbiome
Fitzsimons MS, Novotny M, Lo CC, Dichosa AE, Yee-Greenbaum JL, Snook JP, Gu W, Chertkov O, Davenport KW, McMurry K, Reitenga KG, Daughton AR, He J, Johnson SL, Gleasner CD, Wills PL, Parson-Quintana B, Chain PS, Detter JC, Lasken RS, Han CS
PMID: 23493677
The New phytologist. 2013-04-01; 198.2: 398-407.
Transcriptomic analysis of metabolic function in the giant kelp, Macrocystis pyrifera, across depth and season
Konotchick T, Dupont CL, Valas RE, Badger JH, Allen AE
PMID: 23488966
Microbial ecology. 2013-04-01; 65.3: 773-80.
The restoration of the vaginal microbiota after treatment for bacterial vaginosis with metronidazole or probiotics
Ling Z, Liu X, Chen W, Luo Y, Yuan L, Xia Y, Nelson KE, Huang S, Zhang S, Wang Y, Yuan J, Li L, Xiang C
PMID: 23250116
Nucleic acids research. 2013-04-01; 41.8: e91.
SPA: a short peptide assembler for metagenomic data
Yang Y, Yooseph S
PMID: 23435317
The FEBS journal. 2013-04-01; 280.8: 1750-63.
Structural analysis of the Rhizoctonia solani agglutinin reveals a domain-swapping dimeric assembly
Skamnaki VT, Peumans WJ, Kantsadi AL, Cubeta MA, Plas K, Pakala S, Zographos SE, Smagghe G, Nierman WC, Van Damme EJ, Leonidas DD
PMID: 23402398
Proceedings of the National Academy of Sciences of the United States of America. 2013-03-26; 110.13: 5010-5.
Molecular mechanism of quinone signaling mediated through S-quinonization of a YodB family repressor QsrR
Ji Q, Zhang L, Jones MB, Sun F, Deng X, Liang H, Cho H, Brugarolas P, Gao YN, Peterson SN, Lan L, Bae T, He C
PMID: 23479646
Genome announcements. 2013-03-14; 1.2: e0004413.
Genome Sequence of the Group III Clostridium botulinum Strain Eklund-C
Hassan KA, Tetu SG, Elbourne LD, Johnson EA, Paulsen IT
PMID: 23516187
PLoS genetics. 2013-03-14; 9.3: e1003309.
Complex patterns of genomic admixture within southern Africa
Petersen DC, Libiger O, Tindall EA, Hardie RA, Hannick LI, Glashoff RH, Mukerji M, Indian Genome Variation Consortium, Fernandez P, Haacke W, Schork NJ, Hayes VM
PMID: 23516368
Cell host & microbe. 2013-03-13; 13.3: 314-23.
Defining influenza A virus hemagglutinin antigenic drift by sequential monoclonal antibody selection
Das SR, Hensley SE, Ince WL, Brooke CB, Subba A, Delboy MG, Russ G, Gibbs JS, Bennink JR, Yewdell JW
PMID: 23498956
Cold Spring Harbor perspectives in biology. 2013-03-01; 5.3: a008649.
Evolution of the animal apoptosis network
Zmasek CM, Godzik A
PMID: 23457257