Publications

Nucleic acids research. 2012-01-01; 40.Database issue: D486-9.
ccPDB: compilation and creation of data sets from Protein Data Bank
Singh H, Chauhan JS, Gromiha MM, Open Source Drug Discovery Consortium, Raghava GP
PMID: 22139939
Ecology letters. 2012-01-01; 15.1: 24-33.
Migratory flyway and geographical distance are barriers to the gene flow of influenza virus among North American birds
Lam TT, Ip HS, Ghedin E, Wentworth DE, Halpin RA, Stockwell TB, Spiro DJ, Dusek RJ, Bortner JB, Hoskins J, Bales BD, Yparraguirre DR, Holmes EC
PMID: 22008513
PloS one. 2012-01-01; 7.5: e30495.
Functionally stable and phylogenetically diverse microbial enrichments from microbial fuel cells during wastewater treatment
Ishii S, Suzuki S, Norden-Krichmar TM, Nealson KH, Sekiguchi Y, Gorby YA, Bretschger O
PMID: 22347379
Nucleic acids research. 2012-01-01; 40.Database issue: D237-41.
CharProtDB: a database of experimentally characterized protein annotations
Madupu R, Richter A, Dodson RJ, Brinkac L, Harkins D, Durkin S, Shrivastava S, Sutton G, Haft D
PMID: 22140108
Methods in molecular biology (Clifton, N.J.). 2012-01-01; 944.35-55.
From bacterial to microbial ecosystems (metagenomics)
Williamson SJ, Yooseph S
PMID: 22144147
Molecular biology and evolution. 2012-01-01; 29.1: 367-79.
Evolution and functional diversification of fructose bisphosphate aldolase genes in photosynthetic marine diatoms
Allen AE, Moustafa A, Montsant A, Eckert A, Kroth PG, Bowler C
PMID: 21903677
Nucleic acids research. 2012-01-01; 40.Database issue: D593-8.
ViPR: an open bioinformatics database and analysis resource for virology research
Pickett BE, Sadat EL, Zhang Y, Noronha JM, Squires RB, Hunt V, Liu M, Kumar S, Zaremba S, Gu Z, Zhou L, Larson CN, Dietrich J, Klem EB, Scheuermann RH
PMID: 22006842
PloS one. 2012-01-01; 7.5: e29879.
Innate immune response of human alveolar macrophages during influenza A infection
Wang J, Nikrad MP, Travanty EA, Zhou B, Phang T, Gao B, Alford T, Ito Y, Nahreini P, Hartshorn K, Wentworth D, Dinarello CA, Mason RJ
PMID: 22396727
PloS one. 2012-01-01; 7.3: e33016.
Molecular epidemiology of Neisseria meningitidis serogroup B in Brazil
de Filippis I, de Lemos AP, Hostetler JB, Wollenberg K, Sacchi CT, Dunning Hotopp JC, Harrison LH, Bash MC, Prevots DR
PMID: 22431994
Journal of bacteriology. 2012-01-01; 194.2: 376-94.
A Rickettsia genome overrun by mobile genetic elements provides insight into the acquisition of genes characteristic of an obligate intracellular lifestyle
Gillespie JJ, Joardar V, Williams KP, Driscoll T, Hostetler JB, Nordberg E, Shukla M, Walenz B, Hill CA, Nene VM, Azad AF, Sobral BW, Caler E
PMID: 22056929