Publications

PloS one. 2012-01-01; 7.5: e42047.

Metagenomic exploration of viruses throughout the Indian Ocean

Williamson SJ, Allen LZ, Lorenzi HA, Fadrosh DW, Brami D, Thiagarajan M, McCrow JP, Tovchigrechko A, Yooseph S, Venter JC

PMID: 23082107

Molecular biology and evolution. 2012-01-01; 29.1: 367-79.

Evolution and functional diversification of fructose bisphosphate aldolase genes in photosynthetic marine diatoms

Allen AE, Moustafa A, Montsant A, Eckert A, Kroth PG, Bowler C

PMID: 21903677

PloS one. 2012-01-01; 7.5: e32219.

Identifying low pH active and lactate-utilizing taxa within oral microbiome communities from healthy children using stable isotope probing techniques

McLean JS, Fansler SJ, Majors PD, McAteer K, Allen LZ, Shirtliff ME, Lux R, Shi W

PMID: 22403637

Methods in molecular biology (Clifton, N.J.). 2012-01-01; 944.175-92.

Influenza A virus molecular virology techniques

Zhou B, Wentworth DE

PMID: 22528160

PloS one. 2012-01-01; 7.5: e44224.

Groundtruthing next-gen sequencing for microbial ecology-biases and errors in community structure estimates from PCR amplicon pyrosequencing

Lee CK, Herbold CW, Polson SW, Wommack KE, Williamson SJ, McDonald IR, Cary SC

PMID: 22970184

Nucleic acids research. 2012-01-01; 40.Database issue: D486-9.

ccPDB: compilation and creation of data sets from Protein Data Bank

Singh H, Chauhan JS, Gromiha MM, Open Source Drug Discovery Consortium, Raghava GP

PMID: 22139939

PloS one. 2012-01-01; 7.5: e34064.

The natural product domain seeker NaPDoS: a phylogeny based bioinformatic tool to classify secondary metabolite gene diversity

Ziemert N, Podell S, Penn K, Badger JH, Allen E, Jensen PR

PMID: 22479523

Methods in cell biology. 2012-01-01; 109.53-81.

Whole genome studies of Tetrahymena

Coyne RS, Stover NA, Miao W

PMID: 22444143

PloS one. 2012-01-01; 7.3: e33903.

Comparative omics-driven genome annotation refinement: application across Yersiniae

Schrimpe-Rutledge AC, Jones MB, Chauhan S, Purvine SO, Sanford JA, Monroe ME, Brewer HM, Payne SH, Ansong C, Frank BC, Smith RD, Peterson SN, Motin VL, Adkins JN

PMID: 22479471

PloS one. 2012-01-01; 7.5: e33604.

Transcriptional and proteomic analysis of the Aspergillus fumigatus ΔprtT protease-deficient mutant

Hagag S, Kubitschek-Barreira P, Neves GW, Amar D, Nierman W, Shalit I, Shamir R, Lopes-Bezerra L, Osherov N

PMID: 22514608