Publications

Proceedings of the National Academy of Sciences of the United States of America. 2019-04-30; 116.18: 8960-8965.

Functional characterization of 3D protein structures informed by human genetic diversity

Hicks M, Bartha I, di Iulio J, Venter JC, Telenti A

PMID: 30988206

Proceedings of the National Academy of Sciences of the United States of America. 2019-04-23; 116.17: 8499-8504.

Klebsiella and Providencia emerge as lone survivors following long-term starvation of oral microbiota

Baker JL, Hendrickson EL, Tang X, Lux R, He X, Edlund A, McLean JS, Shi W

PMID: 30975748

mBio. 2019-04-16; 10.2:

Identification of the Bacterial Biosynthetic Gene Clusters of the Oral Microbiome Illuminates the Unexplored Social Language of Bacteria during Health and Disease

Aleti G, Baker JL, Tang X, Alvarez R, Dinis M, Tran NC, Melnik AV, Zhong C, Ernst M, Dorrestein PC, Edlund A

PMID: 30992349

BMC bioinformatics. 2019-04-15; 20.1: 185.

Highly efficient hypothesis testing methods for regression-type tests with correlated observations and heterogeneous variance structure

Zhang Y, Bandyopadhyay G, Topham DJ, Falsey AR, Qiu X

PMID: 30987598

Journal of proteome research. 2019-04-05; 18.4: 1907-1915.

Self-Assembled STrap for Global Proteomics and Salivary Biomarker Discovery

Lin YH, Eguez RV, Torralba MG, Singh H, Golusinski P, Goliusinski W, Golusinski W, Masternak M, Nelson KE, Freire M, Yu Y

PMID: 30848925

Frontiers in microbiology. 2019-04-03; 10.664.

Removal of a Subset of Non-essential Genes Fully Attenuates a Highly Virulent Mycoplasma Strain

Jores J, Ma L, Ssajjakambwe P, Schieck E, Liljander A, Chandran S, Stoffel MH, Cippa V, Arfi Y, Assad-Garcia N, Falquet L, Sirand-Pugnet P, Blanchard A, Lartigue C, Posthaus H, Labroussaa F, Vashee S

PMID: 31001234

mBio. 2019-04-02; 10.2:

Antibodies Elicited by an NS1-Based Vaccine Protect Mice against Zika Virus

Bailey MJ, Broecker F, Duehr J, Arumemi F, Krammer F, Palese P, Tan GS

PMID: 30940710

Virus research. 2019-04-02; 263.173-178.

Optimization of qRT-PCR assay for zika virus detection in human serum and urine

Del Pilar Martinez Viedma M, Puri V, Oldfield LM, Shabman RS, Tan GS, Pickett BE

PMID: 30742853

Microbial ecology. 2019-04-01; 77.3: 808-820.

Co-occurrence of Anaerobes in Human Chronic Wounds

Choi Y, Banerjee A, McNish S, Couch KS, Torralba MG, Lucas S, Tovchigrechko A, Madupu R, Yooseph S, Nelson KE, Shanmugam VK, Chan AP

PMID: 30141127

The New phytologist. 2019-04-01; 222.2: 1061-1075.

Lycophyte plastid genomics: extreme variation in GC, gene and intron content and multiple inversions between a direct and inverted orientation of the rRNA repeat

Mower JP, Ma PF, Grewe F, Taylor A, Michael TP, VanBuren R, Qiu YL

PMID: 30556907