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Scientists Gather for Microbial Genomics Conference
A decade after the dawn of the genomics era, some of the world's top scientists in the field of microbial genomics are gathering in Halifax, Canada, for the International Conference on Microbial Genomes. Speakers will discuss metagenomics, comparative genomics, population processes, genome evolution and environmental genomics.
Venter Institute Studies Microbes Living in Air
Air Genome Project to Sample Air Using Whole Genome Shotgun Sequencing
Sifting Through Fruitfly Sequences, Scientists Discover New Wolbachias
Finding the genomic equivalent of gold nuggets in the rough ore of a much larger set of data, TIGR scientists and collaborators have discovered the genomes of three new types of the microbe Wolbachia in fruitfly sequence data.
Venter Institute to Sequence More Than 100 Key Marine Microbes in One Year
Data To Help Scientists Study Biodiversity, Ecology, Evolution, and Health
Genome of Deadly Amoeba Shows Surprising Complexity; Study Reveals Evidence for Lateral Gene Transfer from Bacteria
The genome sequence of the parasitic amoeba Entamoeba histolytica, a leading cause of severe diarrheal disease in developing countries, includes an unexpectedly complex repertoire of sensory genes as well as a variety of bacterial-like genes that contribute to the organism's unique biology. TIGR scientists led the project, which presents the first genome-wide study of an amoeba. About 50 million people a year are infected by the parasite, which causes as many as 100,000 deaths annually.
Scientists Decipher Genome of a Fungus That Causes Life-Threatening Infections in Persons With Impaired Immunity
Cryptococcus Study Sheds Light On How Fungi Cause Disease
Scientists Decipher Genome of Bacterium that Helps Clean Up Major Groundwater Pollutants
Cryptococcus Study Sheds Light On How Fungi Cause Disease
Scientists Reveal Molecular Secrets of the Malaria Parasite
Groundbreaking Research Project May Help Boost Vaccine Development
Genome Comparison of Four Campylobacter Strains Yields New Genetic Markers and Clues to Virulence
In a study that could benefit medical and food-safety research, scientists have used the tools of comparative genomics to find new clues about why some strains of the bacterium <em>Campylobacter</em> - which each year cause more than 400 million cases of gastrointestinal disease - are more virulent than others. The analysis is helping researchers develop more comprehensive detection methods for analyzing human and environmental isolates of the bacteria.
Microbe's Genome Reveals Insights Into Ocean Ecology
Unexpected findings about the genetic makeup of a marine microbe have given scientists a new perspective on how bacteria make a living in the ocean - a view that may prove useful in wider studies of marine ecology. The analysis by TIGR and collaborators of the DNA sequence of Silicibacter pomeroyi found that the metabolic strategies of marine bacterioplankton are more diverse and less conventional than previously thought.
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New ways to analyze metagenomics data
Are you looking for new tools to analyze your metagenomics data? Are you using MG-RAST, IMG/M or MEGAN for your daily metagenomics work? JCVI is working on a user friendly alternative that you might be looking for - a new tool kit for metagenomics data visualization and analysis built using...
DNA microarrays vs RNAseq — The winner and new heavyweight champion is?... It’s a draw.
In the past year or so there have been several articles stating that the death of microarray technology is growing near. These proclamations are due to the more recently introduced methodology referred to as RNAseq. At first glance I wrote these claims off as being silly and premature. Over time...
Science Festivals
With spring around the corner (or at least we hope), there are several upcoming science festivals. These festivals are designed to provide students and families opportunities to find out what is happening in local science research institutes, universities and companies. These organizations are...
Waste-to-Electricity?
Many of us don’t spend a lot of time pondering wastewater treatment unless we absolutely have to. However, we may need to start rethinking this dirty job. In the United States wastewater treatment is a multi-billion dollar industry that is facing major challenges in the...
300 Papers
Congratulations to Ken Nealson for publishing his 300th paper! Ken has been a driving force in microbiology for 40 years having published several seminal papers in microbial ecology. In the 1980s he helped to pioneer the field of geobiology and discovered bacteria that thrive on metal. Dr....
2010 Internship Program Ready to Go
Are you thinking about summer already? We are!! The 2010 Summer Internship Program is open to accept applications. Last year, we received and reviewed over 300 applications from all over the US and the world for our summer program. Interns were selected to work in most of the research groups...
Scientist Spotlight: Karen Nelson
Karen’s interest in the natural world was sparked at a young age. Born in Jamaica, she enjoyed the outdoors and wonders of nature. Karen was drawn to animals and wanted to become a veterinarian, but after taking some human and animal nutrition courses in college she was hooked on microbiology....
Antarctic Epiblog: Leaving McMurdo
Ice formation outside McMurdo Station After we took our samples out at the ice edge, we returned to McMurdo Station for several intense days of demobilization. We had to return all of the large drills, power equipment and camping gear, and spent a considerable time preparing our own gear...
Station IV: The Ice Edge
Our last station in our Ross Sea transect was out at the ice edge, about two miles north of our previous station, Station III. We were interested to see how plankton in the open polynya were different from the phytoplankton we isolated from areas locked in sea-ice. Polynyas are ice-free areas of...
How AI can help us decode immunity
Artificial intelligence and machine learning will be the keys to unraveling how the human immune system prevents and controls disease
Construction of an Escherichia coli genome with fewer codons sets records
The biggest synthetic genome so far has been made, with a smaller set of amino-acid-encoding codons than usual — raising the prospect of encoding proteins that contain unnatural amino-acid residues.
Public Health is the Next Big Thing at UC San Diego
Researchers have swapped the genome of gut germ E. coli for an artificial one
By creating a new genome, scientists could create organisms tailored to produce desirable compounds
Genetically modified bacteria-killing viruses used on patient for first time
Hair claimed to belong to Leonardo da Vinci to undergo DNA testing
Critics, however, argue that this effort is flawed from the beginning
Students learn about genomics, a life in science, at J. Craig Venter Institute
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