Marcelo Freire, DDS, PhD, DMedSc

Associate Professor

Marcelo Freire is an associate professor in the Genomic Medicine and Infectious Disease Department at the J. Craig Venter Institute (JCVI). Prior to joining JCVI, Dr. Freire was an assistant faculty member at The Forsyth Institute and Harvard University (Division of Oral Medicine, Infection and Immunity). Early in his career, he worked on tissue biology of infectious diseases, biofilm-induced bone diseases and antibody engineering. As a dual-scientist and clinician, Dr. Freire’s initial training provided insights in human physiology and unmet clinical needs. As a current president of the Clinical and Translational Science Network (IADR), Dr. Freire is focused on applications of scientific innovations to health care. His research focuses on investigating biological deficiencies in chronic diseases.

Dr. Freire has extensive experience in host response, inflammation biology, transcriptomics and antibody engineering. Inflammation is a fundamental physiological process of normal and pathological conditions. He has led studies that developed novel therapeutics in control of chronic diseases. At JCVI, Dr. Freire is working on investigating links integrating microbiome, metabolism and immune response. In particular his lab is studying mechanisms controlling innate recognition, phagocytosis and activation signals of adaptive immune responses.

Dr. Freire received a DDS from College of Dentistry, Campos, Rio de Janeiro, a PhD in Craniofacial Molecular Biology from University of Southern California, and DMedSc in Oral Medicine and Infectious Diseases from Harvard University.  

Research Priorities

Inflammation Biology
  • Basic physiology of inflammatory response, with specific interest on neutrophils and granulocytes.
  • Chronic inflammation pathology including type 2 diabetes, cardiovascular diseases, cancer and periodontal diseases.
  • Activation of Phagocytosis
  • G-protein receptors regulation of inflammatory response.
  • Resolution of inflammation and tissue response.
  • Single cell heterogeneity.
Drug Discovery
  • Monoclonal antibody development.
  • Genomic and transcriptomic studies of novel biomarkers.
  • Engineering of agonist, antagonist and tethering therapeutics to host/microbial antigens.
  • Biomaterial and surface modification with biologics.
  • Phagocytosis of biomaterials.
Integration of Microbiome-Metabolism-Immune Systems
  • Host microbial interactions, including communications inducing metainflammation.
  • Evolution of immune sensing and responsiveness.
  • Transcriptional response regulation of cell plasticity.
  • Dietary perturbation of human/microbial biology.
  • Cell fate decisions in heterogeneous micro-environments.

Inflammation: Friend or Foe?

JCVI Associate Professor, Marcelo Freire, DDS, PhD, DMSc, continues to lead the field as he investigates the critical role the human microbiome plays in inflammation as the pathway to chronic disease.

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Coronavirus Research

Overview of various projects related to the novel coronavirus pandemic.

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Saliva Proteome Database

The Human Salivary Proteome (HSP) Wiki as a public data portal for searching and retrieving custom-curated information about the proteome of human saliva.
Wan Hin Choi
Software Engineer
Salim Abraham Soria
Research Associate I
Michele Matsuoka
Research Associate II
Shuvrajyoti Deb Roy, MS
Intern
I-Lin "Link" Wu
Software Engineer II
Innovative Research Programs - Inflammation: Friend or Foe
18-Sep-2024
Collaborator Release

Prebys Introduces 2024 Grant Funding to Enhance Career Opportunities for Youth Across San Diego County

Organizations Receiving Part of the $5.89 Million Foster a Thriving San Diego Workforce

Prebys funds 24 grantees as part of a commitment to ensuring San Diego County youth are thriving and actively engaged in their communities

18-Apr-2024
Press Release

Groundbreaking study reveals oral microbiome’s role in immune response and COVID-19 severity

Newly developed AI model shows that saliva is a better predictor of COVID-19 severity than existing blood tests

22-Feb-2024
Collaborator Release

New LongCOVID research launched by PolyBio’s global consortium of scientists

Funding will deepen research on the persistence of the SARS-CoV-2 virus in LongCOVID patients and launch new clinical trials

08-Sep-2022
Reuters

Top scientists join forces to study leading theory behind long COVID

Several JCVI scientists will be contributing to the newly launched Long Covid Research Initiative — a collaboration of researchers, clinicians, and patients working to rapidly study and treat long Covid.

25-May-2021
Collaborator Release

New wiki on salivary proteins may transform diagnostic testing and personalized medicine

Database curates info on inner workings of saliva, an attractive tool for noninvasive diagnostics and precision medicine

27-Oct-2020
Collaborator Release

Study reveals mouth as primary source of COVID-19 infection, spread

UNC-Chapel Hill, NIH identify sites in the oral cavity where coronavirus can take hold

22-Aug-2019
Workshop Alert

JCVI/AADR Fall Focused Symposium

Integrating Omic Datasets Towards Translation